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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM1Serine and arginine repetitive matrix 1. (916 aa)    
Predicted Functional Partners:
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.997
RBM25
RNA binding motif protein 25.
   
 0.997
TCERG1
Transcription elongation regulator 1.
   
 0.993
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.992
PRPF38A
pre-mRNA processing factor 38A.
   
 0.990
ENSCWAP00000018467
annotation not available
   
 0.990
CDC40
Cell division cycle 40.
    
 0.988
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.987
PPIL1
Peptidylprolyl isomerase like 1.
    
 0.987
ALYREF
Aly/REF export factor.
    
 0.987
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.