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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIGA1Mitoguardin 1. (631 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2.
    
 
0.956
NEXN
Nexilin F-actin binding protein.
 
   
 0.768
PPHLN1
Periphilin 1.
      
 0.652
CDAN1
Codanin 1.
      
 0.648
JCHAIN
Joining chain of multimeric IgA and IgM.
      
 0.645
ERN1
Endoplasmic reticulum to nucleus signaling 1.
      
 0.625
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
      
 0.617
SURF6
Surfeit 6.
     
 0.600
SCFD1
Sec1 family domain containing 1.
      
 0.598
PLD3
Phospholipase D family member 3.
      
 0.597
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.