EPHA1 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

EPHA1

EPH receptor A1. (980 aa)

Predicted Functional Partners:

EFNA1

0.997

EFNA5

0.994

EFNA2

0.992

EFNA3

0.992

EFNA4

0.977

EFNB2

0.956

NGEF

0.955

EFNB1

0.951

EFNB3

0.937

RASA1

0.918

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFNA1	EFNA2	ENSCWAP00000026321	ENSCWAP00000016515	Ephrin A1.	Ephrin A2.	0.516
EFNA1	EFNA3	ENSCWAP00000026321	ENSCWAP00000026270	Ephrin A1.	Ephrin A3.	0.869
EFNA1	EFNA4	ENSCWAP00000026321	ENSCWAP00000026228	Ephrin A1.	Ephrin A4.	0.837
EFNA1	EFNA5	ENSCWAP00000026321	ENSCWAP00000000162	Ephrin A1.	Ephrin A5.	0.874
EFNA1	EFNB1	ENSCWAP00000026321	ENSCWAP00000001190	Ephrin A1.	Ephrin B1.	0.689
EFNA1	EFNB2	ENSCWAP00000026321	ENSCWAP00000008662	Ephrin A1.	Ephrin B2.	0.739
EFNA1	EFNB3	ENSCWAP00000026321	ENSCWAP00000005963	Ephrin A1.	Ephrin B3.	0.677
EFNA1	EPHA1	ENSCWAP00000026321	ENSCWAP00000006613	Ephrin A1.	EPH receptor A1.	0.997
EFNA1	NGEF	ENSCWAP00000026321	ENSCWAP00000028560	Ephrin A1.	Neuronal guanine nucleotide exchange factor.	0.583
EFNA1	RASA1	ENSCWAP00000026321	ENSCWAP00000024392	Ephrin A1.	RAS p21 protein activator 1.	0.893
EFNA2	EFNA1	ENSCWAP00000016515	ENSCWAP00000026321	Ephrin A2.	Ephrin A1.	0.516
EFNA2	EFNA3	ENSCWAP00000016515	ENSCWAP00000026270	Ephrin A2.	Ephrin A3.	0.495
EFNA2	EFNA4	ENSCWAP00000016515	ENSCWAP00000026228	Ephrin A2.	Ephrin A4.	0.500
EFNA2	EFNA5	ENSCWAP00000016515	ENSCWAP00000000162	Ephrin A2.	Ephrin A5.	0.635
EFNA2	EFNB1	ENSCWAP00000016515	ENSCWAP00000001190	Ephrin A2.	Ephrin B1.	0.766
EFNA2	EFNB2	ENSCWAP00000016515	ENSCWAP00000008662	Ephrin A2.	Ephrin B2.	0.776
EFNA2	EFNB3	ENSCWAP00000016515	ENSCWAP00000005963	Ephrin A2.	Ephrin B3.	0.707
EFNA2	EPHA1	ENSCWAP00000016515	ENSCWAP00000006613	Ephrin A2.	EPH receptor A1.	0.992
EFNA2	NGEF	ENSCWAP00000016515	ENSCWAP00000028560	Ephrin A2.	Neuronal guanine nucleotide exchange factor.	0.561
EFNA2	RASA1	ENSCWAP00000016515	ENSCWAP00000024392	Ephrin A2.	RAS p21 protein activator 1.	0.869