Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA3PTPRF interacting protein alpha 3. (1194 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.955
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.890
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.887
PPFIA1
PTPRF interacting protein alpha 1.
   
  0.885
PPFIA2
PTPRF interacting protein alpha 2.
   
  0.885
PPFIA4
PTPRF interacting protein alpha 4.
   
  0.885
ERC1
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.879
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 
 0.876
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
   0.873
ERC2
ELKS/RAB6-interacting/CAST family member 2.
    
 
 0.822
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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