NAA60 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAA60

N(alpha)-acetyltransferase 60, NatF catalytic subunit. (242 aa)

Predicted Functional Partners:

NAA10

0.951

TADA3

0.934

NAA16

0.927

NAA15

0.927

NAA11

0.919

HYPK

0.907

DR1

0.899

NAA25

0.882

SGF29

0.881

TAF1B

0.878

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR1	NAA60	ENSCWAP00000013469	ENSCWAP00000006619	Down-regulator of transcription 1.	N(alpha)-acetyltransferase 60, NatF catalytic subunit.	0.899
DR1	SGF29	ENSCWAP00000013469	ENSCWAP00000023660	Down-regulator of transcription 1.	SAGA complex associated factor 29.	0.984
DR1	TADA3	ENSCWAP00000013469	ENSCWAP00000028895	Down-regulator of transcription 1.	Transcriptional adaptor 3.	0.984
DR1	TAF1B	ENSCWAP00000013469	ENSCWAP00000014910	Down-regulator of transcription 1.	TATA-box binding protein associated factor, RNA polymerase I subunit B.	0.951
HYPK	NAA10	ENSCWAP00000004617	ENSCWAP00000012745	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	0.961
HYPK	NAA11	ENSCWAP00000004617	ENSCWAP00000019432	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	0.961
HYPK	NAA15	ENSCWAP00000004617	ENSCWAP00000028156	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 15, NatA auxiliary subunit.	0.939
HYPK	NAA16	ENSCWAP00000004617	ENSCWAP00000000404	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 16, NatA auxiliary subunit.	0.951
HYPK	NAA25	ENSCWAP00000004617	ENSCWAP00000021324	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.686
HYPK	NAA60	ENSCWAP00000004617	ENSCWAP00000006619	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 60, NatF catalytic subunit.	0.907
NAA10	HYPK	ENSCWAP00000012745	ENSCWAP00000004617	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	Huntingtin interacting protein K.	0.961
NAA10	NAA11	ENSCWAP00000012745	ENSCWAP00000019432	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	0.895
NAA10	NAA15	ENSCWAP00000012745	ENSCWAP00000028156	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 15, NatA auxiliary subunit.	0.994
NAA10	NAA16	ENSCWAP00000012745	ENSCWAP00000000404	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 16, NatA auxiliary subunit.	0.992
NAA10	NAA25	ENSCWAP00000012745	ENSCWAP00000021324	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.973
NAA10	NAA60	ENSCWAP00000012745	ENSCWAP00000006619	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 60, NatF catalytic subunit.	0.951
NAA11	HYPK	ENSCWAP00000019432	ENSCWAP00000004617	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	Huntingtin interacting protein K.	0.961
NAA11	NAA10	ENSCWAP00000019432	ENSCWAP00000012745	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	0.895
NAA11	NAA15	ENSCWAP00000019432	ENSCWAP00000028156	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	N(alpha)-acetyltransferase 15, NatA auxiliary subunit.	0.993
NAA11	NAA16	ENSCWAP00000019432	ENSCWAP00000000404	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	N(alpha)-acetyltransferase 16, NatA auxiliary subunit.	0.992