Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIMELESSTimeless circadian regulator. (1207 aa)    
Predicted Functional Partners:
TIPIN
TIMELESS interacting protein.
   
 0.999
CLSPN
Claspin.
   
 0.990
CRY1
Cryptochrome circadian regulator 1.
    
 0.986
MCM7
Minichromosome maintenance complex component 7.
   
 
 0.985
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.983
CHEK1
Checkpoint kinase 1.
   
 0.982
WRN
WRN RecQ like helicase.
   
 0.982
POLA1
DNA polymerase alpha 1, catalytic subunit.
   
 
 0.980
MCM3
Minichromosome maintenance complex component 3.
   
 
 0.979
MCM2
Minichromosome maintenance complex component 2.
   
 
 0.977
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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