Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MARCHF6Membrane associated ring-CH-type finger 6. (910 aa)    
Predicted Functional Partners:
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 
 0.977
SQLE
Squalene epoxidase.
    
 
 0.970
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
 
 0.956
AMFR
Autocrine motility factor receptor.
    
 
 0.924
SYVN1
Synoviolin 1.
    
 
 0.924
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.910
ENSCWAP00000024421
annotation not available
    
 
 0.901
C1QTNF12
C1q and TNF related 12.
    
 
 0.900
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
 
 0.893
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.878
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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