STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYRM1LYR motif containing 1. (122 aa)    
Predicted Functional Partners:
EEF2
Eukaryotic translation elongation factor 2.
    
 0.897
ETFRF1
Electron transfer flavoprotein regulatory factor 1.
      
 0.883
B9D1
B9 domain containing 1.
    
 0.832
B9D2
B9 domain containing 2.
    
 0.812
ENSCWAP00000012587
annotation not available
      
 0.754
RAB3IL1
RAB3A interacting protein like 1.
     
 0.741
KIN
Kin17 DNA and RNA binding protein.
    
 0.737
ENSCWAP00000023212
annotation not available
    
 0.734
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.734
TCTN2
Tectonic family member 2.
    
 0.728
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.