Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAXIP1PAX interacting protein 1. (995 aa)    
Predicted Functional Partners:
PAGR1
PAXIP1 associated glutamate rich protein 1.
    
 0.991
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.975
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.966
NCOA6
Nuclear receptor coactivator 6.
   
 0.963
ATM
ATM serine/threonine kinase.
   
 0.959
TP53BP1
Tumor protein p53 binding protein 1.
   
 0.958
KDM6A
Lysine demethylase 6A.
    
 0.955
KMT2C
Lysine methyltransferase 2C.
    
 0.953
BRCA1
BRCA1 DNA repair associated.
   
 0.949
KDM6B
Lysine demethylase 6B.
    
 0.941
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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