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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC2IQ motif and Sec7 domain ArfGEF 2. (1468 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6.
    
 
 0.748
BBOF1
Basal body orientation factor 1.
      
 0.712
GPR160
G protein-coupled receptor 160.
      
 0.706
RPS6KA6
Ribosomal protein S6 kinase A6.
      
 0.697
ZNFX1
Zinc finger NFX1-type containing 1.
      
 0.679
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
     
0.670
CTC1
CST telomere replication complex component 1.
      
 0.668
CYTH4
Cytohesin 4.
    
0.666
DLGAP1
DLG associated protein 1.
   
 
 0.664
BORCS5
BLOC-1 related complex subunit 5.
      
 0.650
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.