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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPD52L1TPD52 like 1. (209 aa)    
Predicted Functional Partners:
TPD52
Tumor protein D52.
    
 
0.858
TPD52L2
TPD52 like 2.
    
 
0.730
RRP8
Ribosomal RNA processing 8.
      
 0.725
ENSCWAP00000008265
annotation not available
     
 0.700
RAB5B
RAB5B, member RAS oncogene family.
     
 0.700
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
      
 0.672
BBX
BBX high mobility group box domain containing.
      
 0.653
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
      
 0.641
ENSCWAP00000018219
annotation not available
     
 0.640
CLTC
Clathrin heavy chain.
     
 0.627
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.