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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCML4Scm polycomb group protein like 4. (414 aa)    
Predicted Functional Partners:
FBXL19
F-box and leucine rich repeat protein 19.
    
 0.806
KDM2A
Lysine demethylase 2A.
    
 0.806
KDM2B
Lysine demethylase 2B.
    
 0.806
PCGF6
Polycomb group ring finger 6.
    
 0.789
KDM6B
Lysine demethylase 6B.
    
 0.780
KDM6A
Lysine demethylase 6A.
    
 0.780
BARD1
BRCA1 associated RING domain 1.
    
  0.779
RING1
Ring finger protein 1.
    
 0.713
RNF2
Ring finger protein 2.
    
 0.713
YAF2
YY1 associated factor 2.
    
 0.695
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.