Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCML4Scm polycomb group protein like 4. (414 aa)    
Predicted Functional Partners:
CBX7
Chromobox 7.
    
 0.713
RING1
Ring finger protein 1.
    
 0.702
RNF2
Ring finger protein 2.
    
 0.702
GPR33
G protein-coupled receptor 33 (gene/pseudogene).
      
 0.700
YAF2
YY1 associated factor 2.
    
 0.698
RYBP
RING1 and YY1 binding protein.
    
 0.698
PCGF6
Polycomb group ring finger 6.
    
 0.694
SLC45A1
Solute carrier family 45 member 1.
   
  
 0.693
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.686
PCGF2
Polycomb group ring finger 2.
    
 0.672
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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