Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF576Zinc finger protein 576. (190 aa)    
Predicted Functional Partners:
AP4B1
Adaptor related protein complex 4 subunit beta 1.
    
   0.946
AJUBA
Ajuba LIM protein.
    
   0.877
PDLIM7
PDZ and LIM domain 7.
    
   0.814
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
WTIP
WT1 interacting protein.
    
   0.625
LIMD1
LIM domains containing 1.
    
   0.625
HSCB
HscB mitochondrial iron-sulfur cluster cochaperone.
    
 
 0.607
FAHD2A
Fumarylacetoacetate hydrolase domain containing 2A.
      
 0.584
BOLA3
bolA family member 3.
      
 0.569
PDLIM5
PDZ and LIM domain 5.
    
   0.534
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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