Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATN1Atrophin 1. (1189 aa)    
Predicted Functional Partners:
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.980
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 
 0.976
RERE
Arginine-glutamic acid dipeptide repeats.
   
 
 0.893
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 0.885
WDR5
WD repeat domain 5.
    
   0.862
WDR5B
WD repeat domain 5B.
    
   0.862
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
  0.854
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
  0.854
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
   
 
 0.849
FAT2
FAT atypical cadherin 2.
    
 0.829
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.