STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMBLCarboxymethylenebutenolidase homolog. (245 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex 1.
    
   0.868
TRAPPC8
Trafficking protein particle complex 8.
    
   0.868
TRAPPC11
Trafficking protein particle complex 11.
    
   0.864
TRAPPC12
Trafficking protein particle complex 12.
    
   0.864
ENSCWAP00000017285
annotation not available
  
 
 0.855
TRAPPC2L
Trafficking protein particle complex 2 like.
    
   0.840
ENSCWAP00000002633
annotation not available
    
   0.810
TRAPPC13
Trafficking protein particle complex 13.
    
   0.810
JOSD1
Josephin domain containing 1.
      
 0.775
SLC16A14
Solute carrier family 16 member 14.
   
  
 0.766
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.