STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZIC5Zic family member 5. (657 aa)    
Predicted Functional Partners:
AKAP8L
A-kinase anchoring protein 8 like.
    
 
 0.702
ENSCWAP00000009129
annotation not available
    
 0.602
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
    
 
 0.579
ALX3
ALX homeobox 3.
    
 
 0.564
DDX42
DEAD-box helicase 42.
    
 
 0.558
ITCH
Itchy E3 ubiquitin protein ligase.
    
 
 0.546
WDR81
WD repeat domain 81.
      
 0.533
SLC38A11
Solute carrier family 38 member 11.
    
 
 0.528
SUFU
SUFU negative regulator of hedgehog signaling.
    
  0.519
GGT7
Gamma-glutamyltransferase 7.
      
 0.518
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.