Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REC114REC114 meiotic recombination protein. (265 aa)    
Predicted Functional Partners:
XRCC1
X-ray repair cross complementing 1.
   
 0.953
MEI4
Meiotic double-stranded break formation protein 4.
    
 
 0.952
LIG3
DNA ligase 3.
   
 0.944
TTF2
Transcription termination factor 2.
  
 
 0.924
FCSK
Fucose kinase.
  
 
 0.908
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.852
LIG4
DNA ligase 4.
   
 0.826
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.824
POLB
DNA polymerase beta.
    
 0.819
POLL
DNA polymerase lambda.
    
 0.819
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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