STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC28A2Solute carrier family 28 member 2. (658 aa)    
Predicted Functional Partners:
TMEM140
Transmembrane protein 140.
      
 0.545
BTNL2
Butyrophilin like 2.
      
 0.530
EMC10
ER membrane protein complex subunit 10.
    
   0.524
SLC29A2
Solute carrier family 29 member 2.
      
 0.494
EMC3
ER membrane protein complex subunit 3.
    
   0.491
FRMD3
FERM domain containing 3.
      
 0.487
ENSCWAP00000018526
annotation not available
      
 0.466
IFNL1
Interferon lambda 1.
      
 0.465
SLC6A12
Solute carrier family 6 member 12.
      
 0.444
GART
annotation not available
      
 0.438
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.