STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HRCHistidine rich calcium binding protein. (574 aa)    
Predicted Functional Partners:
TRDN
Triadin.
   
 0.964
ATP2A2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2.
   
 0.943
ATP2A1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
   
 0.931
ATP2A3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3.
   
 0.915
MTA1
Metastasis associated 1.
    
 
 0.850
FANCM
FA complementation group M.
    
 0.695
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.695
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.689
DDX20
DEAD-box helicase 20.
    
 0.681
POLD1
DNA polymerase delta 1, catalytic subunit.
    
 0.676
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.