STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000006743annotation not available (620 aa)    
Predicted Functional Partners:
DFFB
DNA fragmentation factor subunit beta.
    
   0.658
VPS39
VPS39 subunit of HOPS complex.
      
 0.602
NUP42
Nucleoporin 42.
     
 0.592
FBXW7
F-box and WD repeat domain containing 7.
      
 0.587
TEC
Tec protein tyrosine kinase.
   
  
 0.586
ENSCWAP00000001027
annotation not available
      
 0.583
MED18
Mediator complex subunit 18.
      
 0.583
KREMEN2
Kringle containing transmembrane protein 2.
      
 0.582
RANBP2
RAN binding protein 2.
    
 0.555
NHEJ1
Non-homologous end joining factor 1.
      
 0.555
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.