STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAF1TRPM8 channel associated factor 1. (921 aa)    
Predicted Functional Partners:
TRPM8
Transient receptor potential cation channel subfamily M member 8.
      
 0.628
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
      
 0.610
DUSP22
Dual specificity phosphatase 22.
      
 0.597
ENSCWAP00000018374
annotation not available
      
 0.582
ENSCWAP00000007662
annotation not available
      
 0.576
BIRC7
Baculoviral IAP repeat containing 7.
      
 0.533
GPRIN2
G protein regulated inducer of neurite outgrowth 2.
      
 0.531
ENSCWAP00000002119
annotation not available
      
 0.529
CD27
CD27 molecule.
    
   0.516
UBXN1
UBX domain protein 1.
    
   0.510
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.