STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLNSarcolipin. (31 aa)    
Predicted Functional Partners:
ATP2A2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2.
   
 0.989
ATP2A1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
   
 0.985
ATP2A3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3.
   
 0.969
PLN
Phospholamban.
   
 
 0.955
ENSCWAP00000029289
annotation not available
     
 0.952
ENSCWAP00000022818
annotation not available
     
 0.929
MYL1
Myosin light chain 1.
   
  
 0.888
MYOZ1
Myozenin 1.
   
  
 0.857
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
  
 0.820
ATP2C2
ATPase secretory pathway Ca2+ transporting 2.
   
 0.774
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.