Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GATMGlycine amidinotransferase. (423 aa)    
Predicted Functional Partners:
GAMT
Guanidinoacetate N-methyltransferase.
    
 0.979
AGXT2
Alanine--glyoxylate aminotransferase 2.
     
 0.949
AZIN2
Antizyme inhibitor 2.
     
 0.945
AGMAT
Agmatinase.
     
 0.924
ARG2
Arginase 2.
     
 0.924
GLDC
Glycine decarboxylase.
     
 0.923
SARDH
Sarcosine dehydrogenase.
     
 0.919
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
    
 0.918
GNMT
Glycine N-methyltransferase.
     
 0.916
ENSCWAP00000008238
annotation not available
    
 0.913
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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