Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TACC1Transforming acidic coiled-coil containing protein 1. (809 aa)    
Predicted Functional Partners:
ENSCWAP00000016999
annotation not available
    
 
 0.959
CKAP5
Cytoskeleton associated protein 5.
    
 0.957
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
   0.924
AURKA
Aurora kinase A.
    
 0.904
VAPA
VAMP associated protein A.
    
   0.883
NIF3L1
NGG1 interacting factor 3 like 1.
    
   0.874
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 
 0.850
MEMO1
Mediator of cell motility 1.
    
  0.829
FBXW11
F-box and WD repeat domain containing 11.
    
   0.802
ENSCWAP00000002048
annotation not available
    
   0.787
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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