STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARD6BPar-6 family cell polarity regulator beta. (373 aa)    
Predicted Functional Partners:
PARD3
Par-3 family cell polarity regulator.
   
 0.992
CDC42
Cell division cycle 42.
    
 0.989
ENSCWAP00000016956
annotation not available
    
 0.985
PRKCI
Protein kinase C iota.
    
 0.982
MPP5
Membrane palmitoylated protein 5.
   
 0.964
RAC1
Rac family small GTPase 1.
    
 0.951
RAC2
Rac family small GTPase 2.
    
 0.951
RAC3
Rac family small GTPase 3.
    
 0.951
PARD6A
Par-6 family cell polarity regulator alpha.
   
  0.940
PARD3B
Par-3 family cell polarity regulator beta.
   
 0.940
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.