STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIGD7Tigger transposable element derived 7. (544 aa)    
Predicted Functional Partners:
POGK
Pogo transposable element derived with KRAB domain.
      
 0.743
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats.
    
   0.651
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.605
CIAO3
Cytosolic iron-sulfur assembly component 3.
      
 0.581
TXNDC15
Thioredoxin domain containing 15.
    
   0.535
STARD7
StAR related lipid transfer domain containing 7.
      
 0.525
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.525
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
  
 0.525
GLIS2
GLIS family zinc finger 2.
      
 0.517
LRRC52
Leucine rich repeat containing 52.
      
 0.506
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.