STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF217Ring finger protein 217. (541 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 0.922
ENSCWAP00000007885
annotation not available
    
 0.902
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
 0.902
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.898
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
   
 0.872
ENSCWAP00000025072
annotation not available
    
 0.830
ENSCWAP00000019878
annotation not available
   
 0.816
ENSCWAP00000020892
annotation not available
    
 0.785
ENSCWAP00000006692
annotation not available
    
  0.771
RPS27A
Ribosomal protein S27a.
    
  0.771
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.