Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPHP1Nephrocystin 1. (671 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
   
 0.999
RPGRIP1L
RPGRIP1 like.
    
 0.998
ENSCWAP00000019577
annotation not available
    
 
 0.974
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 
 0.954
TMEM67
Transmembrane protein 67.
   
  
 0.904
PTK2B
Protein tyrosine kinase 2 beta.
    
 0.901
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.894
TCTN1
Tectonic family member 1.
      
 0.883
INVS
Inversin.
    
 
 0.851
TMEM216
Transmembrane protein 216.
      
 0.838
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.