STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HBS1LHBS1 like translational GTPase. (686 aa)    
Predicted Functional Partners:
PELO
Pelota mRNA surveillance and ribosome rescue factor.
   
 0.997
EXOSC5
Exosome component 5.
    
 0.992
EXOSC7
Exosome component 7.
    
 0.992
EXOSC1
Exosome component 1.
    
 0.991
EXOSC9
Exosome component 9.
   
 0.991
EXOSC4
Exosome component 4.
    
 0.991
EXOSC8
Exosome component 8.
    
 0.990
EXOSC3
Exosome component 3.
    
 0.988
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
   
 0.985
EXOSC2
Exosome component 2.
    
 0.979
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.