Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CADM4Cell adhesion molecule 4. (388 aa)    
Predicted Functional Partners:
CADM3
Cell adhesion molecule 3.
    
  0.819
HEPACAM2
HEPACAM family member 2.
    
   0.749
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
      
 0.648
ENSCWAP00000028484
annotation not available
    
 
 0.598
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
      
 0.582
CD200
CD200 molecule.
    
 0.559
PLA2G4A
Phospholipase A2 group IVA.
     
  0.556
ACSF2
acyl-CoA synthetase family member 2.
      
 0.555
LRRC4
Leucine rich repeat containing 4.
    
 
 0.543
GJE1
Gap junction protein epsilon 1.
      
 0.542
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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