STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTO1LTO1 maturation factor of ABCE1. (137 aa)    
Predicted Functional Partners:
ENSCWAP00000002517
annotation not available
   
 0.987
ENSCWAP00000009397
annotation not available
   
 0.987
ABCE1
ATP binding cassette subfamily E member 1.
    
 
 0.949
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.828
CIAPIN1
Cytokine induced apoptosis inhibitor 1.
     
 0.720
PPFIA1
PTPRF interacting protein alpha 1.
      
 0.649
CIAO1
Cytosolic iron-sulfur assembly component 1.
     
 0.567
PEBP4
Phosphatidylethanolamine binding protein 4.
      
 0.562
ENSCWAP00000000311
annotation not available
      
 0.524
ASIP
Agouti signaling protein.
      
 0.518
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.