STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAN2poly(A) specific ribonuclease subunit PAN2. (1202 aa)    
Predicted Functional Partners:
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.999
PABPC4
poly(A) binding protein cytoplasmic 4.
    
 0.911
PABPC1L
poly(A) binding protein cytoplasmic 1 like.
    
 0.904
PABPC1
poly(A) binding protein cytoplasmic 1.
    
 0.904
ENSCWAP00000022586
annotation not available
    
 0.904
PABPC4L
poly(A) binding protein cytoplasmic 4 like.
    
 0.904
PCNA
Proliferating cell nuclear antigen.
  
 0.892
TNRC6C
Trinucleotide repeat containing adaptor 6C.
    
 
 0.854
ENSCWAP00000003626
annotation not available
    
 0.842
ENSCWAP00000003633
annotation not available
    
 0.842
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.