Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMA3Laminin subunit alpha 3. (3333 aa)    
Predicted Functional Partners:
ITGA6
Integrin subunit alpha 6.
    
 0.989
LAMB3
Laminin subunit beta 3.
   
0.986
LAMC1
Laminin subunit gamma 1.
   
0.985
ITGB1
Integrin subunit beta 1.
    
 0.975
ITGA7
Integrin subunit alpha 7.
    
 0.973
ITGB4
Integrin subunit beta 4.
   
 0.969
LAMC2
Laminin subunit gamma 2.
   
 0.968
LAMC3
Laminin subunit gamma 3.
   
 0.957
ITGA3
Integrin subunit alpha 3.
   
 0.952
CD44
CD44 molecule (Indian blood group).
    
 0.940
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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