STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF11Ring finger protein 11. (154 aa)    
Predicted Functional Partners:
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 
 0.979
ITCH
Itchy E3 ubiquitin protein ligase.
    
 
 0.977
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.960
TNFAIP3
TNF alpha induced protein 3.
    
 
 0.954
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.954
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.948
TAX1BP1
Tax1 binding protein 1.
   
 
 0.936
ENSCWAP00000002640
annotation not available
    
 0.934
ENSCWAP00000020442
annotation not available
    
 0.934
EPS15
Epidermal growth factor receptor pathway substrate 15.
    
 
 0.918
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.