Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTPALAlpha tocopherol transfer protein like. (342 aa)    
Predicted Functional Partners:
INO80
INO80 complex ATPase subunit.
    
   0.743
ENSCWAP00000023743
annotation not available
    
   0.742
VPS72
Vacuolar protein sorting 72 homolog.
    
   0.728
HSD17B11
Hydroxysteroid 17-beta dehydrogenase 11.
   
  0.677
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13.
   
  0.677
DHRS3
Dehydrogenase/reductase 3.
    
  0.666
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5.
    
  0.666
RDH10
Retinol dehydrogenase 10.
    
  0.666
DMAP1
DNA methyltransferase 1 associated protein 1.
    
   0.594
CYP51A1
Cytochrome P450 family 51 subfamily A member 1.
    
 
 0.585
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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