STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF1Allograft inflammatory factor 1. (147 aa)    
Predicted Functional Partners:
TYROBP
TYRO protein tyrosine kinase binding protein.
   
  
 0.957
FCER1G
Fc fragment of IgE receptor Ig.
   
  
 0.917
ENSCWAP00000006999
annotation not available
   
    0.877
C1QA
Complement C1q A chain.
   
 
 0.814
CX3CR1
C-X3-C motif chemokine receptor 1.
   
  
 0.797
ITGB2
Integrin subunit beta 2.
   
 
 0.787
GFAP
Glial fibrillary acidic protein.
    
 0.763
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.744
IL1B
Interleukin 1 beta.
   
  
 0.733
RBFOX3
RNA binding fox-1 homolog 3.
    
 
 0.725
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.