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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC4APTransient receptor potential cation channel subfamily C member 4 associated protein. (797 aa)    
Predicted Functional Partners:
DDB2
Damage specific DNA binding protein 2.
     
 0.998
DDB1
Damage specific DNA binding protein 1.
    
 0.994
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.992
CUL4A
Cullin 4A.
    
 0.989
DCAF6
DDB1 and CUL4 associated factor 6.
    
 0.988
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.984
DCAF8
DDB1 and CUL4 associated factor 8.
    
 0.982
ENSCWAP00000026015
annotation not available
   
 
 0.972
CUL4B
Cullin 4B.
    
 0.967
DDA1
DET1 and DDB1 associated 1.
    
  0.927
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.