Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TRPC4APTransient receptor potential cation channel subfamily C member 4 associated protein. (797 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.984
DDA1
DET1 and DDB1 associated 1.
    
  0.936
CUL4A
Cullin 4A.
    
 0.926
CUL4B
Cullin 4B.
    
 0.917
ENSCWAP00000026015
annotation not available
   
 
 0.911
DCAF6
DDB1 and CUL4 associated factor 6.
    
 0.869
TNFRSF1A
TNF receptor superfamily member 1A.
    
 
 0.848
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.811
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.810
DCAF8
DDB1 and CUL4 associated factor 8.
    
 0.796
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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