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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A4Solute carrier family 7 member 4. (636 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
   
 0.830
SLC3A2
Solute carrier family 3 member 2.
   
 0.706
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.693
KIAA0513
KIAA0513.
   
 0.693
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.686
MST1R
Macrophage stimulating 1 receptor.
    
  0.686
ENSCWAP00000004227
annotation not available
    
 0.670
PPIL4
Peptidylprolyl isomerase like 4.
   
  
 0.654
SLC23A3
Solute carrier family 23 member 3.
      
 0.623
SLC43A2
Solute carrier family 43 member 2.
      
 0.597
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.