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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRHD1peptidyl-tRNA hydrolase domain containing 1. (140 aa)    
Predicted Functional Partners:
GNAL
G protein subunit alpha L.
    
 0.944
PDE6A
Phosphodiesterase 6A.
    
 0.940
PDE3A
Phosphodiesterase 3A.
    
 0.933
PDE4B
Phosphodiesterase 4B.
    
 0.911
GNAS
GNAS complex locus.
    
 0.910
PDE5A
Phosphodiesterase 5A.
    
 0.910
PDE1C
Phosphodiesterase 1C.
     
 0.898
PDE2A
Phosphodiesterase 2A.
    
 0.897
PDE6B
Phosphodiesterase 6B.
    
 0.884
PDE6C
Phosphodiesterase 6C.
    
 0.882
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.