Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTRHD1peptidyl-tRNA hydrolase domain containing 1. (140 aa)    
Predicted Functional Partners:
GNAL
G protein subunit alpha L.
    
 0.951
GNAS
GNAS complex locus.
    
 0.942
PDE6A
Phosphodiesterase 6A.
    
 0.936
PDE3A
Phosphodiesterase 3A.
    
 0.926
PDE6B
Phosphodiesterase 6B.
    
 0.922
PDE6C
Phosphodiesterase 6C.
    
 0.908
PDE3B
Phosphodiesterase 3B.
    
 0.908
GNAO1
G protein subunit alpha o1.
    
 0.905
GNG13
G protein subunit gamma 13.
    
 0.905
PDE2A
Phosphodiesterase 2A.
    
 0.904
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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