Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRGAP1SLIT-ROBO Rho GTPase activating protein 1. (1085 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.918
SRGAP3
SLIT-ROBO Rho GTPase activating protein 3.
   
  0.918
ROBO2
Roundabout guidance receptor 2.
    
 0.913
ITSN2
Intersectin 2.
   
 0.905
ROBO1
Roundabout guidance receptor 1.
    
 0.898
ITSN1
Intersectin 1.
    
 0.807
WASL
WASP like actin nucleation promoting factor.
   
 0.684
WAS
WASP actin nucleation promoting factor.
   
 0.684
ROBO4
Roundabout guidance receptor 4.
    
 0.672
GRB2
Growth factor receptor bound protein 2.
    
 0.669
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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