Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL9Mitochondrial ribosomal protein L9. (268 aa)    
Predicted Functional Partners:
MRPL19
Mitochondrial ribosomal protein L19.
   
 0.998
MRPL32
Mitochondrial ribosomal protein L32.
   
 0.997
MRPL12
Mitochondrial ribosomal protein L12.
   
 0.997
MRPL17
Mitochondrial ribosomal protein L17.
  
 0.996
MRPL20
Mitochondrial ribosomal protein L20.
  
 0.996
ENSCWAP00000022796
annotation not available
  
 0.996
MRPL3
Mitochondrial ribosomal protein L3.
  
 0.996
MRPL21
Mitochondrial ribosomal protein L21.
  
 0.995
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.995
MRPL15
Mitochondrial ribosomal protein L15.
   
 0.994
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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