Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM3Actin binding LIM protein family member 3. (683 aa)    
Predicted Functional Partners:
RAC2
Rac family small GTPase 2.
     
 0.900
RAC3
Rac family small GTPase 3.
     
 0.900
RAC1
Rac family small GTPase 1.
     
 0.899
CDC42
Cell division cycle 42.
     
 0.899
ENSCWAP00000025228
annotation not available
     
  0.890
ABLIM1
Actin binding LIM protein 1.
     
  0.890
DMTN
Dematin actin binding protein.
     
 0.825
ADD2
Adducin 2.
    
 0.703
ADD1
Adducin 1.
    
 0.703
ADD3
Adducin 3.
    
 0.703
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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