Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFAPGlial fibrillary acidic protein. (468 aa)    
Predicted Functional Partners:
VIM
Vimentin.
   
  0.985
NES
Nestin.
    
 
 0.978
ENSCWAP00000019069
annotation not available
   
 
 0.957
NEFL
Neurofilament light.
   
 
 0.952
INA
Internexin neuronal intermediate filament protein alpha.
   
   0.951
MAPT
Microtubule associated protein tau.
   
 
 0.950
CASP3
Caspase 3.
    
 0.925
PDLIM1
PDZ and LIM domain 1.
   
 
 0.891
DCX
Doublecortin.
    
 
 0.890
PXDN
Peroxidasin.
      
 0.887
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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