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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFAPGlial fibrillary acidic protein. (468 aa)    
Predicted Functional Partners:
CASP3
Caspase 3.
    
 0.936
ENSCWAP00000019069
annotation not available
   
 
 0.897
AQP4
Aquaporin 4.
   
  
 0.894
BDNF
Brain derived neurotrophic factor.
      
 0.881
PXDN
Peroxidasin.
      
 0.853
TBR1
T-box brain transcription factor 1.
      
 0.840
VIM
Vimentin.
  
 
0.817
PLP1
Proteolipid protein 1.
   
 
 0.810
IL6
Interleukin 6.
   
  
 0.800
PAX6
Paired box 6.
    
 
 0.800
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.