TMEM50A protein (Catagonus wagneri) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TMEM50A

Transmembrane protein 50A. (157 aa)

Predicted Functional Partners:

LEPROT

0.957

LEPROTL1

0.957

ENSCWAP00000007316

0.910

IGF2R

0.784

ENSCWAP00000004537

0.783

ENSCWAP00000007929

0.783

ENSCWAP00000011838

0.783

SYF2

0.754

RSRP1

0.754

ENSCWAP00000007636

0.754

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000004537	ENSCWAP00000007316	ENSCWAP00000004537	ENSCWAP00000007316	annotation not available	annotation not available	0.988
ENSCWAP00000004537	ENSCWAP00000007929	ENSCWAP00000004537	ENSCWAP00000007929	annotation not available	annotation not available	0.998
ENSCWAP00000004537	ENSCWAP00000011838	ENSCWAP00000004537	ENSCWAP00000011838	annotation not available	annotation not available	0.998
ENSCWAP00000004537	TMEM50A	ENSCWAP00000004537	ENSCWAP00000006946	annotation not available	Transmembrane protein 50A.	0.783
ENSCWAP00000007316	ENSCWAP00000004537	ENSCWAP00000007316	ENSCWAP00000004537	annotation not available	annotation not available	0.988
ENSCWAP00000007316	ENSCWAP00000007929	ENSCWAP00000007316	ENSCWAP00000007929	annotation not available	annotation not available	0.983
ENSCWAP00000007316	ENSCWAP00000011838	ENSCWAP00000007316	ENSCWAP00000011838	annotation not available	annotation not available	0.983
ENSCWAP00000007316	TMEM50A	ENSCWAP00000007316	ENSCWAP00000006946	annotation not available	Transmembrane protein 50A.	0.910
ENSCWAP00000007636	RSRP1	ENSCWAP00000007636	ENSCWAP00000006910	annotation not available	Arginine and serine rich protein 1.	0.754
ENSCWAP00000007636	SYF2	ENSCWAP00000007636	ENSCWAP00000006862	annotation not available	SYF2 pre-mRNA splicing factor.	0.616
ENSCWAP00000007636	TMEM50A	ENSCWAP00000007636	ENSCWAP00000006946	annotation not available	Transmembrane protein 50A.	0.754
ENSCWAP00000007929	ENSCWAP00000004537	ENSCWAP00000007929	ENSCWAP00000004537	annotation not available	annotation not available	0.998
ENSCWAP00000007929	ENSCWAP00000007316	ENSCWAP00000007929	ENSCWAP00000007316	annotation not available	annotation not available	0.983
ENSCWAP00000007929	TMEM50A	ENSCWAP00000007929	ENSCWAP00000006946	annotation not available	Transmembrane protein 50A.	0.783
ENSCWAP00000011838	ENSCWAP00000004537	ENSCWAP00000011838	ENSCWAP00000004537	annotation not available	annotation not available	0.998
ENSCWAP00000011838	ENSCWAP00000007316	ENSCWAP00000011838	ENSCWAP00000007316	annotation not available	annotation not available	0.983
ENSCWAP00000011838	TMEM50A	ENSCWAP00000011838	ENSCWAP00000006946	annotation not available	Transmembrane protein 50A.	0.783
IGF2R	TMEM50A	ENSCWAP00000003723	ENSCWAP00000006946	Insulin like growth factor 2 receptor.	Transmembrane protein 50A.	0.784
LEPROT	TMEM50A	ENSCWAP00000012541	ENSCWAP00000006946	Leptin receptor overlapping transcript.	Transmembrane protein 50A.	0.957
LEPROTL1	TMEM50A	ENSCWAP00000019111	ENSCWAP00000006946	Leptin receptor overlapping transcript like 1.	Transmembrane protein 50A.	0.957