Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFG1LAFG1 like ATPase. (480 aa)    
Predicted Functional Partners:
MRPS9
Mitochondrial ribosomal protein S9.
  
   0.699
GUCD1
Guanylyl cyclase domain containing 1.
      
 0.688
UPB1
Beta-ureidopropionase 1.
      
 0.682
GSTT4
Glutathione S-transferase theta 4.
      
 0.654
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
   
 
 0.610
PLAAT5
Phospholipase A and acyltransferase 5.
      
 0.601
DMGDH
Dimethylglycine dehydrogenase.
      
 0.597
MRPS16
Mitochondrial ribosomal protein S16.
   
   0.594
OVCA2
OVCA2 serine hydrolase domain containing.
    
 
 0.589
MRPS5
Mitochondrial ribosomal protein S5.
    
   0.589
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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