Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A4Solute carrier family 30 member 4. (429 aa)    
Predicted Functional Partners:
SLC30A3
Solute carrier family 30 member 3.
    
 
 0.831
EIF5
Eukaryotic translation initiation factor 5.
    
   0.814
SLC39A4
Solute carrier family 39 member 4.
   
 
 0.810
PDS5B
PDS5 cohesin associated factor B.
    
   0.776
SLC39A13
Solute carrier family 39 member 13.
   
 0.744
C19orf25
Chromosome 19 open reading frame 25.
    
   0.735
PDS5A
PDS5 cohesin associated factor A.
    
   0.698
SLC30A6
Solute carrier family 30 member 6.
    
 
 0.691
SLC30A9
Solute carrier family 30 member 9.
   
 
 0.691
SLC39A6
Solute carrier family 39 member 6.
   
 
 0.669
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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