Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDC4Enhancer of mRNA decapping 4. (1401 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
    
 0.999
EDC3
Enhancer of mRNA decapping 3.
   
 0.999
DDX6
DEAD-box helicase 6.
   
 0.999
DCP1A
Decapping mRNA 1A.
    
 0.999
ENSCWAP00000029111
annotation not available
    
 0.998
XRN1
5'-3' exoribonuclease 1.
    
 
 0.988
ENSCWAP00000024367
annotation not available
    
 0.978
LSM14A
LSM14A mRNA processing body assembly factor.
    
 
 0.973
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.969
PATL2
PAT1 homolog 2.
    
 0.960
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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