Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAF1Fas associated factor 1. (650 aa)    
Predicted Functional Partners:
UBXN1
UBX domain protein 1.
   
0.993
UBXN6
UBX domain protein 6.
    
 0.989
UBXN2B
UBX domain protein 2B.
    
 0.987
VCP
Valosin containing protein.
   
 0.986
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.984
NSFL1C
NSFL1 cofactor.
    
 0.984
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.982
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.981
ENSCWAP00000026989
annotation not available
   
 
 0.977
FAS
Fas cell surface death receptor.
    
 
 0.964
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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