STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHB2Prohibitin 2. (299 aa)    
Predicted Functional Partners:
PHB
Prohibitin.
  
0.999
C1QBP
Complement C1q binding protein.
   
 0.995
STOML2
Stomatin like 2.
   
 0.991
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
  
 0.990
ARFGEF3
ARFGEF family member 3.
    
 
 0.976
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
   
 0.973
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 0.969
ESR1
Estrogen receptor 1.
    
 
 0.964
PMPCB
Peptidase, mitochondrial processing beta subunit.
  
 0.964
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.955
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.