STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP1Receptor accessory protein 1. (284 aa)    
Predicted Functional Partners:
REEP2
Receptor accessory protein 2.
    
 
 0.952
REEP4
Receptor accessory protein 4.
    
 
 0.947
RTP2
Receptor transporter protein 2.
     
 0.884
RTN2
Reticulon 2.
   
 
 0.848
REEP3
Receptor accessory protein 3.
    
 
 0.827
RTP1
Receptor transporter protein 1.
     
 0.815
ATL1
Atlastin GTPase 1.
    
 
 0.791
DAZAP2
DAZ associated protein 2.
    
   0.788
ATL3
Atlastin GTPase 3.
    
 
 0.762
SGF29
SAGA complex associated factor 29.
    
 
 0.746
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.